Package: findGSEP
Type: Package
Title: Estimate Genome Size of Polyploid Species Using k-Mer
        Frequencies
Version: 1.2.0
Authors@R: c(
  person("Laiyi", "Fu", role = c("aut", "cre"), email = "fulaiyi321@163.com"),
  person("Hequan", "Sun", role = "aut"))
Maintainer: Laiyi Fu <fulaiyi321@163.com>
Description: Provides tools to estimate the genome size of polyploid
        species using k-mer frequencies. This package includes
        functions to process k-mer frequency data and perform genome
        size estimation by fitting k-mer frequencies with a normal
        distribution model. It supports handling of complex polyploid
        genomes and offers various options for customizing the
        estimation process. The basic method 'findGSE' is detailed in
        Sun, Hequan, et al. (2018) <doi:10.1093/bioinformatics/btx637>.
License: GPL (>= 2)
Encoding: UTF-8
Depends: R(>= 4.2.0),RColorBrewer,ggplot2,grDevices
Imports: pracma, scales, dplyr,
RoxygenNote: 7.3.1
URL: https://github.com/sperfu/findGSEP
BugReports: https://github.com/sperfu/findGSEP/issues
Suggests: knitr, rmarkdown,
VignetteBuilder: knitr
Repository: https://sperfu.r-universe.dev
Date/Publication: 2024-07-27 03:03:15 UTC
RemoteUrl: https://github.com/sperfu/findgsep
RemoteRef: HEAD
RemoteSha: 8bef3bcce7d9b64e5ae287678ce2699576713281
NeedsCompilation: no
Packaged: 2026-10-08 12:29:22 UTC; root
Author: Laiyi Fu [aut, cre],
  Hequan Sun [aut]